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plotting in log scale
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<li><a href="./python/logplot.html">Plotting data using log axis</a></li>
<li><a href="./python/Setting_up_the_notebook_for_plotting_with_matplotlib.html">Setting up the notebook for plotting with matplotlib</a></li>
<li><a href="./python/Saving_a_matplotlib_figure_with_a_high_resolution.html">Saving a matplotlib figure with a high resolution</a></li>
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<h1>
Plotting data using log axis
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<time class="published" datetime="2018-08-06T16:34:00+02:00">
06 août 2018
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<h1>Plotting in log axis with matplotlib</h1>
<div class="highlight"><pre><span></span><span class="kn">import</span> <span class="nn">matplotlib.pyplot</span> <span class="kn">as</span> <span class="nn">plt</span>
<span class="o">%</span><span class="n">matplotlib</span> <span class="n">inline</span>
<span class="kn">import</span> <span class="nn">numpy</span> <span class="kn">as</span> <span class="nn">np</span>
<span class="n">x</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="mf">0.1</span><span class="p">,</span> <span class="mi">20</span><span class="p">)</span>
<span class="n">y</span> <span class="o">=</span> <span class="mi">20</span><span class="o">*</span><span class="n">np</span><span class="o">.</span><span class="n">exp</span><span class="p">(</span><span class="o">-</span><span class="n">x</span><span class="o">/</span><span class="mf">10.0</span><span class="p">)</span>
</pre></div>
<h2>Plotting using the standard function then specifying the axis scale</h2>
<p>One of the easiest way to plot in a log plot is to specify the plot normally and then specify which axis is to be plotted with a log scale.</p>
<p>This can be specified by the function set_xscale or set_yscale</p>
<div class="highlight"><pre><span></span><span class="c1"># Normal plot</span>
<span class="n">fig</span> <span class="o">=</span> <span class="n">plt</span><span class="o">.</span><span class="n">figure</span><span class="p">()</span>
<span class="n">ax</span> <span class="o">=</span> <span class="n">fig</span><span class="o">.</span><span class="n">add_subplot</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">plot</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">y</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">grid</span><span class="p">()</span>
<span class="n">plt</span><span class="o">.</span><span class="n">show</span><span class="p">()</span>
</pre></div>
<p><img alt="png" src="../images/Plotting+data+using+log+axis/output_6_0.png"></p>
<div class="highlight"><pre><span></span><span class="c1"># Log x axis plot</span>
<span class="n">fig</span> <span class="o">=</span> <span class="n">plt</span><span class="o">.</span><span class="n">figure</span><span class="p">()</span>
<span class="n">ax</span> <span class="o">=</span> <span class="n">fig</span><span class="o">.</span><span class="n">add_subplot</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">plot</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">y</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">set_xscale</span><span class="p">(</span><span class="s1">&#39;log&#39;</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">grid</span><span class="p">()</span>
<span class="n">plt</span><span class="o">.</span><span class="n">show</span><span class="p">()</span>
</pre></div>
<p><img alt="png" src="../images/Plotting+data+using+log+axis/output_7_0.png"></p>
<div class="highlight"><pre><span></span><span class="c1"># Log x axis plot</span>
<span class="n">fig</span> <span class="o">=</span> <span class="n">plt</span><span class="o">.</span><span class="n">figure</span><span class="p">()</span>
<span class="n">ax</span> <span class="o">=</span> <span class="n">fig</span><span class="o">.</span><span class="n">add_subplot</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">plot</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">y</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">set_yscale</span><span class="p">(</span><span class="s1">&#39;log&#39;</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">grid</span><span class="p">()</span>
<span class="n">plt</span><span class="o">.</span><span class="n">show</span><span class="p">()</span>
</pre></div>
<p><img alt="png" src="../images/Plotting+data+using+log+axis/output_8_0.png"></p>
<div class="highlight"><pre><span></span><span class="c1"># Log x axis plot</span>
<span class="n">fig</span> <span class="o">=</span> <span class="n">plt</span><span class="o">.</span><span class="n">figure</span><span class="p">()</span>
<span class="n">ax</span> <span class="o">=</span> <span class="n">fig</span><span class="o">.</span><span class="n">add_subplot</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">plot</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">y</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">set_xscale</span><span class="p">(</span><span class="s1">&#39;log&#39;</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">set_yscale</span><span class="p">(</span><span class="s1">&#39;log&#39;</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">grid</span><span class="p">()</span>
<span class="n">plt</span><span class="o">.</span><span class="n">show</span><span class="p">()</span>
</pre></div>
<p><img alt="png" src="../images/Plotting+data+using+log+axis/output_9_0.png"></p>
<h2>Plotting using the matplotlib defined function</h2>
<p>Matplotlib has the function : semilogx, semilogy and loglog that can help you avoid having to specify the axis scale.</p>
<div class="highlight"><pre><span></span><span class="c1"># Plot using semilogx</span>
<span class="n">fig</span> <span class="o">=</span> <span class="n">plt</span><span class="o">.</span><span class="n">figure</span><span class="p">()</span>
<span class="n">ax</span> <span class="o">=</span> <span class="n">fig</span><span class="o">.</span><span class="n">add_subplot</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">semilogx</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">y</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">grid</span><span class="p">()</span>
<span class="n">plt</span><span class="o">.</span><span class="n">show</span><span class="p">()</span>
</pre></div>
<p><img alt="png" src="../images/Plotting+data+using+log+axis/output_11_0.png"></p>
<div class="highlight"><pre><span></span><span class="c1"># Plot using semilogy</span>
<span class="n">fig</span> <span class="o">=</span> <span class="n">plt</span><span class="o">.</span><span class="n">figure</span><span class="p">()</span>
<span class="n">ax</span> <span class="o">=</span> <span class="n">fig</span><span class="o">.</span><span class="n">add_subplot</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">semilogy</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">y</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">grid</span><span class="p">()</span>
<span class="n">plt</span><span class="o">.</span><span class="n">show</span><span class="p">()</span>
</pre></div>
<p><img alt="png" src="../images/Plotting+data+using+log+axis/output_12_0.png"></p>
<div class="highlight"><pre><span></span><span class="c1"># Plot using loglog</span>
<span class="n">fig</span> <span class="o">=</span> <span class="n">plt</span><span class="o">.</span><span class="n">figure</span><span class="p">()</span>
<span class="n">ax</span> <span class="o">=</span> <span class="n">fig</span><span class="o">.</span><span class="n">add_subplot</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">loglog</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">y</span><span class="p">)</span>
<span class="n">ax</span><span class="o">.</span><span class="n">grid</span><span class="p">()</span>
<span class="n">plt</span><span class="o">.</span><span class="n">show</span><span class="p">()</span>
</pre></div>
<p><img alt="png" src="../images/Plotting+data+using+log+axis/output_13_0.png"></p>
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